main Program

Uses

  • program~~main~5~~UsesGraph program~main~5 main module~leapblock leapBlock program~main~5->module~leapblock module~leapeulerian leapEulerian program~main~5->module~leapeulerian module~leapkinds leapKinds program~main~5->module~leapkinds module~leapparallel leapParallel program~main~5->module~leapparallel module~leapparser leapParser program~main~5->module~leapparser module~leapblock->module~leapkinds module~leapblock->module~leapparallel iso_fortran_env iso_fortran_env module~leapblock->iso_fortran_env module~leapio_hdf5 leapIO_hdf5 module~leapblock->module~leapio_hdf5 mpi_f08 mpi_f08 module~leapblock->mpi_f08 module~leapeulerian->module~leapblock module~leapeulerian->module~leapkinds module~leapeulerian->module~leapparallel module~leapeulerian->iso_fortran_env module~leapio leapIO module~leapeulerian->module~leapio module~leaputils leapUtils module~leapeulerian->module~leaputils module~leapeulerian->mpi_f08 module~leapkinds->iso_fortran_env module~leapparallel->module~leapkinds module~leapparallel->iso_fortran_env module~leapparallel->mpi_f08 module~leapparser->module~leapkinds module~leapparser->iso_fortran_env module~leapcli leapCli module~leapparser->module~leapcli module~leapcli->module~leapkinds module~leapio->module~leapio_hdf5 module~leapio_h5hut leapIO_h5hut module~leapio->module~leapio_h5hut module~leapio_silo leapIO_silo module~leapio->module~leapio_silo module~leapio_xdmf leapIO_xdmf module~leapio->module~leapio_xdmf module~leapio_hdf5->module~leapkinds module~leapio_hdf5->module~leapparallel module~leapio_hdf5->module~leaputils hdf5 hdf5 module~leapio_hdf5->hdf5 module~leaputils->module~leapkinds module~leapio_h5hut->module~leapkinds module~leapio_h5hut->module~leapparallel module~leapio_h5hut->module~leapio_hdf5 module~leapio_silo->module~leapkinds module~leapio_silo->module~leapparallel module~leapio_silo->module~leaputils module~leapio_silo->mpi_f08 module~leapio_xdmf->module~leapkinds module~leapio_xdmf->module~leaputils

Solver: CDIFS

Description: Simulation of 4 counter-rotating Lamb-Oseen vortices in a fully periodic box.

References: Shuai, Shuai, and M. Houssem Kasbaoui. 2022. “Accelerated Decay of a Lamb–Oseen Vortex Tube Laden with Inertial Particles in Eulerian–Lagrangian Simulations.” Journal of Fluid Mechanics 936.



Calls

program~~main~5~~CallsGraph program~main~5 main proc~block_obj_final block_obj%block_obj_Final program~main~5->proc~block_obj_final proc~parser_obj_init parser_obj%parser_obj_init program~main~5->proc~parser_obj_init proc~parser_obj_parsefile parser_obj%parser_obj_ParseFile program~main~5->proc~parser_obj_parsefile proc~setupcasebcs~5 SetUpCaseBCS program~main~5->proc~setupcasebcs~5 proc~setupcaseblock~5 SetUpCaseBlock program~main~5->proc~setupcaseblock~5 proc~setupcasefields~3 SetUpCaseFields program~main~5->proc~setupcasefields~3 mpi_type_free mpi_type_free proc~block_obj_final->mpi_type_free proc~axis_obj_final axis_obj%axis_obj_Final proc~block_obj_final->proc~axis_obj_final proc~cli_obj_get cli_obj%cli_obj_Get proc~parser_obj_parsefile->proc~cli_obj_get proc~parser_obj_parseline parser_obj%parser_obj_ParseLine proc~parser_obj_parsefile->proc~parser_obj_parseline proc~bc_set_add bc_set%bc_set_Add proc~setupcasebcs~5->proc~bc_set_add proc~bc_set_final bc_set%bc_set_Final proc~setupcasebcs~5->proc~bc_set_final proc~bc_set_init bc_set%bc_set_Init proc~setupcasebcs~5->proc~bc_set_init proc~bc_set_setbc bc_set%bc_set_SetBC proc~setupcasebcs~5->proc~bc_set_setbc none~get parser_obj%Get proc~setupcaseblock~5->none~get none~initialize~10 block_obj%Initialize proc~setupcaseblock~5->none~initialize~10 proc~block_obj_partition block_obj%block_obj_Partition proc~setupcaseblock~5->proc~block_obj_partition proc~block_obj_setperiodicity block_obj%block_obj_SetPeriodicity proc~setupcaseblock~5->proc~block_obj_setperiodicity proc~block_obj_setupuniformgrid block_obj%block_obj_SetupUniformGrid proc~setupcaseblock~5->proc~block_obj_setupuniformgrid proc~setupcasefields~3->none~get proc~eulerian_set_add eulerian_set%eulerian_set_Add proc~setupcasefields~3->proc~eulerian_set_add proc~eulerian_set_final eulerian_set%eulerian_set_Final proc~setupcasefields~3->proc~eulerian_set_final proc~eulerian_set_init eulerian_set%eulerian_set_Init proc~setupcasefields~3->proc~eulerian_set_init proc~eulerian_set_setwritefilename eulerian_set%eulerian_set_SetWriteFileName proc~setupcasefields~3->proc~eulerian_set_setwritefilename proc~parallel_obj_rankisroot parallel_obj%parallel_obj_RankIsRoot proc~setupcasefields~3->proc~parallel_obj_rankisroot proc~parser_obj_read0d parser_obj%parser_obj_read0D none~get->proc~parser_obj_read0d proc~parser_obj_read1d parser_obj%parser_obj_read1D none~get->proc~parser_obj_read1d proc~block_obj_init block_obj%block_obj_Init none~initialize~10->proc~block_obj_init proc~block_obj_init2 block_obj%block_obj_Init2 none~initialize~10->proc~block_obj_init2 proc~bc_set_checkbounds bc_set%bc_set_CheckBounds proc~bc_set_add->proc~bc_set_checkbounds proc~bc_set_expand bc_set%bc_set_Expand proc~bc_set_add->proc~bc_set_expand proc~bc_set_getsidedirbynormal bc_set%bc_set_GetSideDirByNormal proc~bc_set_add->proc~bc_set_getsidedirbynormal proc~bc_set_updateextents bc_set%bc_set_UpdateExtents proc~bc_set_add->proc~bc_set_updateextents proc~hashtbl_obj_hashstring hashtbl_obj%hashtbl_obj_HashString proc~bc_set_add->proc~hashtbl_obj_hashstring proc~hashtbl_obj_put hashtbl_obj%hashtbl_obj_Put proc~bc_set_add->proc~hashtbl_obj_put proc~region_obj_init region_obj%region_obj_Init proc~bc_set_add->proc~region_obj_init proc~region_obj_final region_obj%region_obj_Final proc~bc_set_final->proc~region_obj_final proc~hashtbl_obj_init hashtbl_obj%hashtbl_obj_Init proc~bc_set_init->proc~hashtbl_obj_init proc~bc_set_getextents bc_set%bc_set_GetExtents proc~bc_set_setbc->proc~bc_set_getextents proc~bc_set_getregionindex bc_set%bc_set_GetRegionIndex proc~bc_set_setbc->proc~bc_set_getregionindex proc~region_obj_add region_obj%region_obj_Add proc~bc_set_setbc->proc~region_obj_add proc~block_obj_partition->proc~axis_obj_final proc~axis_obj_init axis_obj%axis_obj_Init proc~block_obj_partition->proc~axis_obj_init proc~block_obj_setconveniencepointers block_obj%block_obj_SetConveniencePointers proc~block_obj_partition->proc~block_obj_setconveniencepointers proc~block_obj_setupmpitypes block_obj%block_obj_SetupMPITypes proc~block_obj_partition->proc~block_obj_setupmpitypes proc~block_obj_subdivideblock block_obj%block_obj_SubDivideBlock proc~block_obj_partition->proc~block_obj_subdivideblock proc~block_obj_updategridghostcells block_obj%block_obj_UpdateGridGhostCells proc~block_obj_partition->proc~block_obj_updategridghostcells proc~block_obj_updatemidpoints block_obj%block_obj_UpdateMidPoints proc~block_obj_partition->proc~block_obj_updatemidpoints proc~block_obj_updatespacing block_obj%block_obj_UpdateSpacing proc~block_obj_partition->proc~block_obj_updatespacing proc~parallel_obj_topology parallel_obj%parallel_obj_Topology proc~block_obj_partition->proc~parallel_obj_topology proc~block_obj_setupuniformgrid->proc~axis_obj_init proc~block_obj_setupuniformgrid->proc~block_obj_setconveniencepointers proc~block_obj_setupuniformgrid->proc~block_obj_setupmpitypes proc~block_obj_setupuniformgrid->proc~block_obj_updategridghostcells proc~block_obj_setupuniformgrid->proc~block_obj_updatemidpoints proc~block_obj_setupuniformgrid->proc~block_obj_updatespacing proc~eulerian_obj_init eulerian_obj_base%eulerian_obj_Init proc~eulerian_set_add->proc~eulerian_obj_init proc~eulerian_set_add->proc~hashtbl_obj_hashstring proc~eulerian_set_add->proc~hashtbl_obj_put proc~eulerian_obj_final eulerian_obj_base%eulerian_obj_Final proc~eulerian_set_final->proc~eulerian_obj_final proc~eulerian_set_init->proc~hashtbl_obj_init proc~parser_obj_addentry parser_obj%parser_obj_AddEntry proc~parser_obj_parseline->proc~parser_obj_addentry proc~parser_obj_fetchlabelid parser_obj%parser_obj_FetchLabelID proc~parser_obj_parseline->proc~parser_obj_fetchlabelid proc~parser_obj_reformatline parser_obj%parser_obj_ReformatLine proc~parser_obj_parseline->proc~parser_obj_reformatline proc~bc_set_getextents->proc~bc_set_getregionindex proc~bc_set_getregionindex->proc~hashtbl_obj_hashstring none~get~4 hashtbl_obj%Get proc~bc_set_getregionindex->none~get~4 proc~bc_set_updateextents->proc~bc_set_getregionindex proc~block_obj_init2->proc~block_obj_setupuniformgrid proc~block_obj_setupmpitypes->mpi_type_free mpi_type_commit mpi_type_commit proc~block_obj_setupmpitypes->mpi_type_commit mpi_type_vector mpi_type_vector proc~block_obj_setupmpitypes->mpi_type_vector mpi_irecv mpi_irecv proc~block_obj_updategridghostcells->mpi_irecv mpi_isend mpi_isend proc~block_obj_updategridghostcells->mpi_isend mpi_wait mpi_wait proc~block_obj_updategridghostcells->mpi_wait mpi_waitall mpi_waitall proc~block_obj_updategridghostcells->mpi_waitall proc~block_obj_updateextents block_obj%block_obj_UpdateExtents proc~block_obj_updategridghostcells->proc~block_obj_updateextents proc~sllist_obj_put sllist_obj%sllist_obj_Put proc~hashtbl_obj_put->proc~sllist_obj_put mpi_cart_coords mpi_cart_coords proc~parallel_obj_topology->mpi_cart_coords mpi_cart_create mpi_cart_create proc~parallel_obj_topology->mpi_cart_create mpi_cart_rank mpi_cart_rank proc~parallel_obj_topology->mpi_cart_rank mpi_cart_shift mpi_cart_shift proc~parallel_obj_topology->mpi_cart_shift mpi_comm_rank mpi_comm_rank proc~parallel_obj_topology->mpi_comm_rank mpi_dims_create mpi_dims_create proc~parallel_obj_topology->mpi_dims_create proc~parser_obj_read0d->proc~parser_obj_fetchlabelid none~assigndefault parser_obj%AssignDefault proc~parser_obj_read0d->none~assigndefault proc~parser_obj_read1d->proc~parser_obj_fetchlabelid proc~parser_obj_read1d->none~assigndefault proc~region_obj_add->proc~hashtbl_obj_hashstring proc~region_obj_add->proc~hashtbl_obj_put proc~region_obj_expand region_obj%region_obj_Expand proc~region_obj_add->proc~region_obj_expand proc~hashtbl_obj_final hashtbl_obj%hashtbl_obj_Final proc~region_obj_final->proc~hashtbl_obj_final proc~region_obj_init->proc~hashtbl_obj_init proc~parser_obj_assigndefault0d parser_obj%parser_obj_AssignDefault0D none~assigndefault->proc~parser_obj_assigndefault0d proc~parser_obj_assigndefault1d parser_obj%parser_obj_AssignDefault1D none~assigndefault->proc~parser_obj_assigndefault1d proc~hashtbl_obj_get_int4 hashtbl_obj%hashtbl_obj_Get_int4 none~get~4->proc~hashtbl_obj_get_int4 proc~hashtbl_obj_get_int8 hashtbl_obj%hashtbl_obj_Get_int8 none~get~4->proc~hashtbl_obj_get_int8 proc~hashtbl_obj_get_real_dp hashtbl_obj%hashtbl_obj_Get_real_dp none~get~4->proc~hashtbl_obj_get_real_dp proc~hashtbl_obj_get_real_sp hashtbl_obj%hashtbl_obj_Get_real_sp none~get~4->proc~hashtbl_obj_get_real_sp proc~block_obj_updateextents->proc~axis_obj_init proc~sllist_obj_put->proc~sllist_obj_put none~get~3 sllist_obj%Get proc~hashtbl_obj_get_int4->none~get~3 proc~hashtbl_obj_get_int8->none~get~3 proc~hashtbl_obj_get_real_dp->none~get~3 proc~hashtbl_obj_get_real_sp->none~get~3 proc~sllist_obj_get_int4 sllist_obj%sllist_obj_Get_int4 none~get~3->proc~sllist_obj_get_int4 proc~sllist_obj_get_int8 sllist_obj%sllist_obj_Get_int8 none~get~3->proc~sllist_obj_get_int8 proc~sllist_obj_get_real_dp sllist_obj%sllist_obj_Get_real_dp none~get~3->proc~sllist_obj_get_real_dp proc~sllist_obj_get_real_sp sllist_obj%sllist_obj_Get_real_sp none~get~3->proc~sllist_obj_get_real_sp proc~sllist_obj_get_int4->proc~sllist_obj_get_int4 proc~sllist_obj_get_int8->proc~sllist_obj_get_int8 proc~sllist_obj_get_real_dp->proc~sllist_obj_get_real_dp proc~sllist_obj_get_real_sp->proc~sllist_obj_get_real_sp

Variables

Type Attributes Name Initial
type(block_obj) :: block

Block object manages the Cartesian grid

type(parallel_obj) :: parallel

Utility that handles parallel (MPI) functions

type(parser_obj) :: parser

Utility that parses input files


Subroutines

subroutine SetUpCaseBCS()

Defines boundary conditions.

Arguments

None

subroutine SetUpCaseBlock()

Builds and writes block file.

Arguments

None

subroutine SetUpCaseFields()

Builds and writes initial flow fields.

Arguments

None

Source Code

program main
  !>--------------------------------------------------------------------------
  ! Program: Lamb Oseen
  ! Author: Mohamed Houssem Kasbaoui
  !
  ! Solver: CDIFS
  !
  ! Description: Simulation of 4 counter-rotating Lamb-Oseen vortices in a
  ! fully periodic box.
  !
  ! References:
  ! Shuai, Shuai, and M. Houssem Kasbaoui. 2022. “Accelerated Decay of a
  ! Lamb–Oseen Vortex Tube Laden with Inertial Particles in Eulerian–Lagrangian
  ! Simulations.” Journal of Fluid Mechanics 936.
  ! --------------------------------------------------------------------------
  use leapKinds
  use leapParser
  use leapParallel
  use leapBlock
  use leapEulerian
  implicit none
  type(parallel_obj) :: parallel                                               !! Utility that handles parallel (MPI) functions
  type(parser_obj)   :: parser                                                 !! Utility that parses input files
  type(block_obj)    :: block                                                  !! Block object manages the Cartesian grid

  ! Initialize parser
  call parser%Initialize()

  ! Parse input file
  call parser%ParseFile()

  ! Initialize parallel environment
  call parallel%Initialize()

  ! Set the block info
  call SetUpCaseBlock()

  ! Set the initial fields
  call SetUpCaseFields()

  ! Set boundary conditions
  call SetUpCaseBCS()

  ! Free up data
  call block%Finalize()
  call parser%Finalize()
  call parallel%Finalize()
  contains
    subroutine SetUpCaseBlock()
      !> Builds and writes block file.
      implicit none
      ! Work variables
      character(str64) :: filename
      real(wp)         :: L(3)
      integer          :: N(3)
      integer          :: ngc
      integer          :: Nb(3)
      real(wp)         :: xlo(3)
      real(wp)         :: xhi(3)
      integer          :: ilo(3)
      integer          :: ihi(3)

      ! Get info from parser
      call parser%Get("Block file",  filename)
      call parser%Get("Domain size", L       )
      call parser%Get("Grid points", N       )
      call parser%Get("Ghost cells", ngc     )
      call parser%Get("Partition",   Nb      )

      ! Domain extents
      xlo=-0.5_wp*L ; xhi= 0.5_wp*L
      ilo=[1,1,1] ; ihi=N

      ! Initialize the main block
      call block%Initialize(ngc,parallel)

      ! Setup the domain periodicity
      call block%SetPeriodicity([.false.,.false.,.true.])

      ! Create a uniform block
      call block%SetupUniformGrid(xlo,xhi,ilo,ihi)

      ! Partition block for parallel initializations
      call block%Partition(Nb)

      ! Write block to disk
      call block%Write(filename)

      return
    end subroutine SetUpCaseBlock
    subroutine SetUpCaseFields()
      !> Builds and writes initial flow fields.
      implicit none
      ! Work variables
      type(Eulerian_set)   :: fields
      type(eulerian_obj_r) :: V(3)
      type(eulerian_obj_r) :: P
      character(str64)     :: filename
      real(wp)             :: L(3)
      real(wp)             :: radius
      real(wp)             :: circ
      real(wp)             :: rho
      real(wp)             :: mu
      real(wp)             :: Rey
      real(wp)             :: r
      real(wp)             :: sgn
      real(wp)             :: c(2)
      real(wp)             :: coef
      integer              :: i,j,k
      real(wp),parameter   :: twoPi=8.0_wp*atan(1.0_wp)

      ! Get info from parser
      call parser%Get("Fields IC file",  filename)
      call parser%Get("Domain size",     L       )
      call parser%Get("Vortex radius",   radius  )
      call parser%Get("Circulation",     circ    )
      call parser%Get("Fluid density",   rho     )
      call parser%Get("Fluid viscosity", mu      )

      ! Initialize fields container
      call fields%Initialize(block,parallel)

      ! Add fields to container (this will allocate data)
      call fields%Add('V1', 1, V(1))
      call fields%Add('V2', 2, V(2))
      call fields%Add('V3', 3, V(3))
      call fields%Add('P',  0, P   )


      associate (lo => block%lo, hi=> block%hi,          &
          x =>block%x , y =>block%y,  z => block%z, &
          xm=>block%xm, ym=>block%ym, zm=> block%zm)

        c = [0.5_wp*(block%pmax(1)+block%pmin(1)),0.5_wp*(block%pmax(2)+block%pmin(2))]

        sgn=(-1)
        do k=lo(3),hi(3)
          do j=lo(2),hi(2)
            do i=lo(1),hi(1)
              ! U component
              r = sqrt((x(i)-c(1))**2+(ym(j)-c(2))**2)
              coef = sgn*circ/twoPi/(r+epsilon(1.0_wp))*(1.0_WP-exp(-r**2/radius**2))
              V(1)%cell(i,j,k) = V(1)%cell(i,j,k) - coef*(ym(j)-c(2))/(r+epsilon(1.0_wp))

              ! V component
              r = sqrt((xm(i)-c(1))**2+(y(j)-c(2))**2)
              coef = sgn*circ/twoPi/(r+epsilon(1.0_wp))*(1.0_WP-exp(-r**2/radius**2))
              V(2)%cell(i,j,k) = V(2)%cell(i,j,k) + coef*(xm(i)-c(1))/(r+epsilon(1.0_wp))
            end do
          end do
        end do

        V(3) = 0.0_wp
        P    = 0.0_wp
      end associate

      ! Write some info to stdout
      if (parallel%RankIsRoot()) then
        ! Reynolds number
        Rey = (circ/twoPi/radius)*radius*rho/(mu+epsilon(1.0_wp))
        write(*,*) "Reynolds number = ", Rey
        write(*,*) "Vortex time     = ", twoPi*radius**2/circ
        write(*,*) "radius/dx       = ", radius/(block%dx(1))
        write(*,*) "radius/dy       = ", radius/(block%dx(2))
        write(*,*) "radius/dz       = ", radius/(block%dx(3))
      end if

      ! Write data to disk
      call fields%SetWriteFileName(filename)
      call fields%Write(0,0.0_wp)

      ! Clear data
      call fields%Finalize()

      return
    end subroutine SetUpCaseFields
    subroutine SetUpCaseBCS()
      !> Defines boundary conditions.
      use leapBC
      implicit none
      ! Work variables
      type(bc_set) :: bcs
      real(wp)     :: xhi(3)
      real(wp)     :: xlo(3)

      ! Initialize utility that handles boundary conditions
      call bcs%Initialize(block,parallel)

      associate (pmin => block%pmin, pmax => block%pmax)
        ! - Left boundary
        xlo = [pmin(1),pmin(2),pmin(3)]
        xhi = [pmin(1),pmax(2),pmax(3)]
        call bcs%Add('xL',  xlo, xhi, normal = '+x1')

        ! - xR boundary
        xlo = [pmax(1),pmin(2),pmin(3)]
        xhi = [pmax(1),pmax(2),pmax(3)]
        call bcs%Add('xR',  xlo, xhi, normal = '-x1')

        ! - yL boundary
        xlo = [pmin(1),pmin(2),pmin(3)]
        xhi = [pmax(1),pmin(2),pmax(3)]
        call bcs%Add('yL', xlo, xhi, normal = '+x2')

        ! - yR boundary
        xlo = [pmin(1),pmax(2),pmin(3)]
        xhi = [pmax(1),pmax(2),pmax(3)]
        call bcs%Add('yR',    xlo, xhi, normal = '-x2')
      end associate

      call bcs%SetBC('yR', BC_SYMMETRY, 'V1' )
      call bcs%SetBC('yR', BC_SYMMETRY, 'V2' )
      call bcs%SetBC('yR', BC_SYMMETRY, 'V3' )
      call bcs%SetBC('yR', BC_SYMMETRY, 'P'  )
      call bcs%SetBC('yR', BC_SYMMETRY, 'dP' )

      call bcs%SetBC('yL', BC_SYMMETRY, 'V1' )
      call bcs%SetBC('yL', BC_SYMMETRY, 'V2' )
      call bcs%SetBC('yL', BC_SYMMETRY, 'V3' )
      call bcs%SetBC('yL', BC_SYMMETRY, 'P'  )
      call bcs%SetBC('yL', BC_SYMMETRY, 'dP' )

      call bcs%SetBC('xL', BC_SYMMETRY, 'V1' )
      call bcs%SetBC('xL', BC_SYMMETRY, 'V2' )
      call bcs%SetBC('xL', BC_SYMMETRY, 'V3' )
      call bcs%SetBC('xL', BC_SYMMETRY, 'P'  )
      call bcs%SetBC('xL', BC_SYMMETRY, 'dP' )

      call bcs%SetBC('xR', BC_SYMMETRY, 'V1' )
      call bcs%SetBC('xR', BC_SYMMETRY, 'V2' )
      call bcs%SetBC('xR', BC_SYMMETRY, 'V3' )
      call bcs%SetBC('xR', BC_SYMMETRY, 'P'  )
      call bcs%SetBC('xR', BC_SYMMETRY, 'dP' )

      ! Write boundary conditions
      call bcs%Write(0,0.0_wp)

      ! Clear data
      call bcs%Finalize()

      return
    end subroutine SetUpCaseBCS
end program main